PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20202.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 328aa    MW: 36295.6 Da    PI: 5.6778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20202.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.79e-13127178155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  KHN20202.1 127 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 178
                 79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.4E-13125182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.64E-13125179No hitNo description
SuperFamilySSF474591.83E-15126189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.434126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-10127178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-8132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MALEAVVFPQ SQDPFGGSGY GSVNNKDFYN CTLLAATSPN SWGDYEQHIN INKEEEQGGA  60
SISTFQPESN YPYGNWTSSS SSMLPHFNNE LQETTTTDPS NTLDSLNTRP KRRRAKSRKN  120
KEEIENQRMT HIAVERNRRK QMNEYLSVLR SLMPDSYIQR GDQASIIGGA INFVKELEQR  180
MHFLGAQKEG EGKSEAGGAT NMPFSEFFTF PQYSTSGGGG CSDNSAAVGE DVGEVKCGIA  240
DIEVTMVESH ANLKIRSKKR PKQLLKLVSG LHTMRLTILH LNVTTTGEVV LYSLSVKVED  300
DCKLGSVDDI AAAVYQMLDK IQQEAMLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127138RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0934680.0BT093468.1 Soybean clone JCVI-FLGm-14K7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003556500.10.0PREDICTED: transcription factor bHLH96-like
SwissprotQ9C7T46e-82BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A0B2QKE50.0A0A0B2QKE5_GLYSO; Transcription factor bHLH96
TrEMBLI1NIX10.0I1NIX1_SOYBN; Uncharacterized protein
STRINGGLYMA20G37550.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-81bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]